.. _program_listing_file_cif++_validate.hpp: Program Listing for File validate.hpp ===================================== |exhale_lsh| :ref:`Return to documentation for file ` (``cif++/validate.hpp``) .. |exhale_lsh| unicode:: U+021B0 .. UPWARDS ARROW WITH TIP LEFTWARDS .. code-block:: cpp /*- * SPDX-License-Identifier: BSD-2-Clause * * Copyright (c) 2022 NKI/AVL, Netherlands Cancer Institute * * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: * * 1. Redistributions of source code must retain the above copyright notice, this * list of conditions and the following disclaimer * 2. Redistributions in binary form must reproduce the above copyright notice, * this list of conditions and the following disclaimer in the documentation * and/or other materials provided with the distribution. * * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND * ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED * WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE * DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR * ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES * (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; * LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND * ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT * (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS * SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. */ #pragma once #include "cif++/text.hpp" #include #include #include #include #include #include namespace cif { struct category_validator; // -------------------------------------------------------------------- // New: error_code enum class validation_error { value_does_not_match_rx = 1, value_is_not_in_enumeration_list, not_a_known_primitive_type, undefined_category, unknown_item, incorrect_item_validator, missing_mandatory_items, missing_key_items, item_not_allowed_in_category, empty_file, empty_datablock, empty_category, not_valid_pdbx, }; class validation_category_impl : public std::error_category { public: const char *name() const noexcept override { return "cif::validation"; } std::string message(int ev) const override { switch (static_cast(ev)) { case validation_error::value_does_not_match_rx: return "Value in item does not match regular expression"; case validation_error::value_is_not_in_enumeration_list: return "Value is not in the enumerated list of valid values"; case validation_error::not_a_known_primitive_type: return "The type is not a known primitive type"; case validation_error::undefined_category: return "Category has no definition in the dictionary"; case validation_error::unknown_item: return "Item is not defined to be part of the category"; case validation_error::incorrect_item_validator: return "Incorrectly specified validator for item"; case validation_error::missing_mandatory_items: return "Missing mandatory items"; case validation_error::missing_key_items: return "An index could not be constructed due to missing key items"; case validation_error::item_not_allowed_in_category: return "Requested item not allowed in category according to dictionary"; case validation_error::empty_file: return "The file contains no datablocks"; case validation_error::empty_datablock: return "The datablock contains no categories"; case validation_error::empty_category: return "The category is empty"; case validation_error::not_valid_pdbx: return "The file is not a valid PDBx file"; default: assert(false); return "unknown error code"; } } bool equivalent(const std::error_code & /*code*/, int /*condition*/) const noexcept override { return false; } }; inline std::error_category &validation_category() { static validation_category_impl instance; return instance; } inline std::error_code make_error_code(validation_error e) { return std::error_code(static_cast(e), validation_category()); } inline std::error_condition make_error_condition(validation_error e) { return std::error_condition(static_cast(e), validation_category()); } // -------------------------------------------------------------------- class validation_exception : public std::runtime_error { public: validation_exception(validation_error err) : validation_exception(make_error_code(err)) { } validation_exception(validation_error err, std::string_view category) : validation_exception(make_error_code(err), category) { } validation_exception(validation_error err, std::string_view category, std::string_view item) : validation_exception(make_error_code(err), category, item) { } validation_exception(std::error_code ec); validation_exception(std::error_code ec, std::string_view category); validation_exception(std::error_code ec, std::string_view category, std::string_view item); }; // -------------------------------------------------------------------- enum class DDL_PrimitiveType { Char, UChar, Numb }; DDL_PrimitiveType map_to_primitive_type(std::string_view s); DDL_PrimitiveType map_to_primitive_type(std::string_view s, std::error_code &ec) noexcept; struct regex_impl; struct type_validator { std::string m_name; DDL_PrimitiveType m_primitive_type; regex_impl *m_rx; type_validator() = delete; type_validator(std::string_view name, DDL_PrimitiveType type, std::string_view rx); type_validator(const type_validator &) = delete; type_validator(type_validator &&rhs) : m_name(std::move(rhs.m_name)) , m_primitive_type(rhs.m_primitive_type) { m_rx = std::exchange(rhs.m_rx, nullptr); } type_validator &operator=(const type_validator &) = delete; type_validator &operator=(type_validator &&rhs) { m_name = std::move(rhs.m_name); m_primitive_type = rhs.m_primitive_type; m_rx = std::exchange(rhs.m_rx, nullptr); return *this; } ~type_validator(); bool operator<(const type_validator &rhs) const { return icompare(m_name, rhs.m_name) < 0; } int compare(std::string_view a, std::string_view b) const; }; struct item_alias { item_alias(const std::string &alias_name, const std::string &dictionary, const std::string &version) : m_name(alias_name) , m_dict(dictionary) , m_vers(version) { } item_alias(const item_alias &) = default; item_alias &operator=(const item_alias &) = default; std::string m_name; std::string m_dict; std::string m_vers; }; struct item_validator { std::string m_item_name; bool m_mandatory; const type_validator *m_type; cif::iset m_enums; std::string m_default; category_validator *m_category = nullptr; std::vector m_aliases; bool operator<(const item_validator &rhs) const { return icompare(m_item_name, rhs.m_item_name) < 0; } bool operator==(const item_validator &rhs) const { return iequals(m_item_name, rhs.m_item_name); } void operator()(std::string_view value) const; bool validate_value(std::string_view value, std::error_code &ec) const noexcept; }; struct category_validator { std::string m_name; std::vector m_keys; cif::iset m_groups; cif::iset m_mandatory_items; std::set m_item_validators; bool operator<(const category_validator &rhs) const { return icompare(m_name, rhs.m_name) < 0; } void add_item_validator(item_validator &&v); const item_validator *get_validator_for_item(std::string_view item_name) const; const item_validator *get_validator_for_aliased_item(std::string_view item_name) const; }; struct link_validator { int m_link_group_id; std::string m_parent_category; std::vector m_parent_keys; std::string m_child_category; std::vector m_child_keys; std::string m_link_group_label; }; // -------------------------------------------------------------------- class validator { public: validator(std::string_view name) : m_name(name) { } ~validator() = default; validator(const validator &rhs) = delete; validator &operator=(const validator &rhs) = delete; validator(validator &&rhs) = default; validator &operator=(validator &&rhs) = default; friend class dictionary_parser; void add_type_validator(type_validator &&v); const type_validator *get_validator_for_type(std::string_view type_code) const; void add_category_validator(category_validator &&v); const category_validator *get_validator_for_category(std::string_view category) const; void add_link_validator(link_validator &&v); std::vector get_links_for_parent(std::string_view category) const; std::vector get_links_for_child(std::string_view category) const; void report_error(validation_error err, bool fatal = true) const { report_error(make_error_code(err), fatal); } void report_error(std::error_code ec, bool fatal = true) const; void report_error(validation_error err, std::string_view category, std::string_view item, bool fatal = true) const { report_error(make_error_code(err), category, item, fatal); } void report_error(std::error_code ec, std::string_view category, std::string_view item, bool fatal = true) const; const std::string &name() const { return m_name; } void set_name(const std::string &name) { m_name = name; } const std::string &version() const { return m_version; } void set_version(const std::string &version) { m_version = version; } private: // name is fully qualified here: item_validator *get_validator_for_item(std::string_view name) const; std::string m_name; std::string m_version; bool m_strict = false; std::set m_type_validators; std::set m_category_validators; std::vector m_link_validators; }; // -------------------------------------------------------------------- class validator_factory { public: static validator_factory &instance(); const validator &operator[](std::string_view dictionary_name); const validator &construct_validator(std::string_view name, std::istream &is); private: // -------------------------------------------------------------------- validator_factory() = default; std::mutex m_mutex; std::list m_validators; }; } // namespace cif